Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator cynr | BK659_23980 | Not Available | Negative | 5402880 - 5403752 | 31724.3 |
| carbonic anhydrase | BK659_23985 | Not Available | Positive | 5403862 - 5404521 | 23582.1 |
| cyanase | BK659_23990 | Not Available | Positive | 5404557 - 5405027 | 16870.3 |
| eama family transporter | BK659_23995 | Not Available | Positive | 5405215 - 5406126 | 32838.2 |
| lysr family transcriptional regulator | BK659_24000 | Not Available | Positive | 5406324 - 5407259 | 35320.4 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | BK659_24005 | Not Available | Negative | 5407278 - 5407643 | 13260.0 |
| hypothetical protein | BK659_24010 | Not Available | Negative | 5407728 - 5408918 | 43185.7 |
| lysr family transcriptional regulator | BK659_24015 | Not Available | Negative | 5409003 - 5409941 | 34777.3 |
| hypothetical protein | BK659_24020 | Not Available | Negative | 5410042 - 5412138 | 77160.2 |
| sugar translocase | BK659_24025 | Not Available | Negative | 5412135 - 5412521 | 13817.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
