Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_23880 | Not Available | Positive | 5384744 - 5386855 | 77747.2 |
| hypothetical protein | BK659_23885 | Not Available | Negative | 5386900 - 5387442 | 20303.8 |
| class ii glutamine amidotransferase | BK659_23890 | Not Available | Negative | 5387456 - 5388232 | 28862.2 |
| mfs transporter | BK659_23895 | Not Available | Negative | 5388265 - 5388765 | 18809.0 |
| peptidase s9 | BK659_23900 | Not Available | Positive | 5388866 - 5390920 | 76059.1 |
| cyclic nucleotide-binding protein | BK659_23905 | Not Available | Positive | 5391041 - 5391514 | 16895.4 |
| hypothetical protein | BK659_23910 | Not Available | Negative | 5391511 - 5391801 | 9596.59 |
| hypothetical protein | BK659_23915 | Not Available | Positive | 5391919 - 5392605 | 24490.8 |
| restriction endonuclease | BK659_23920 | Not Available | Positive | 5392656 - 5393030 | 14119.4 |
| 23s rrna methyltransferase | BK659_23925 | Not Available | Positive | 5393239 - 5393709 | 17375.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
