Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK659_23240 | Not Available | Negative | 5231188 - 5232141 | 35884.7 |
| amidohydrolase | BK659_23245 | Not Available | Positive | 5232284 - 5233465 | 42014.2 |
| abc transporter substrate-binding protein | BK659_23250 | Not Available | Positive | 5233562 - 5234350 | 28330.8 |
| elongation factor p | BK659_23255 | Not Available | Negative | 5235198 - 5235767 | 21151.2 |
| hypothetical protein | BK659_23260 | Not Available | Negative | 5235816 - 5236949 | 42745.9 |
| hypothetical protein | BK659_23265 | Not Available | Positive | 5237072 - 5237473 | 15069.2 |
| transcription elongation factor greab | BK659_23270 | Not Available | Positive | 5237476 - 5237958 | 17626.0 |
| transcriptional regulator cysb | BK659_23275 | Not Available | Negative | 5237964 - 5238938 | 36116.9 |
| universal stress protein uspa | BK659_23280 | Not Available | Negative | 5239052 - 5239552 | 18339.1 |
| 5'-nucleotidase | BK659_23285 | Not Available | Negative | 5239637 - 5240542 | 32714.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
