Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate transporter subunit madl | BK659_23190 | Not Available | Positive | 5220864 - 5221280 | 14090.8 |
| malonate transporter subunit madm | BK659_23195 | Not Available | Positive | 5221282 - 5222046 | 25813.3 |
| lysr family transcriptional regulator | BK659_23200 | Not Available | Negative | 5222187 - 5223101 | 34189.6 |
| hypothetical protein | BK659_23205 | Not Available | Negative | 5223155 - 5223853 | 25914.8 |
| murein l,d-transpeptidase | BK659_23210 | Not Available | Positive | 5224004 - 5225575 | 57958.5 |
| 2'-5' rna ligase | BK659_23215 | Not Available | Positive | 5225610 - 5226173 | 20942.5 |
| glycosyltransferase | BK659_23220 | Not Available | Negative | 5226162 - 5226971 | 30552.8 |
| glucarate dehydratase | BK659_23225 | Not Available | Negative | 5227197 - 5228546 | 49427.1 |
| mfs transporter | BK659_23230 | Not Available | Negative | 5228586 - 5229944 | 49551.9 |
| gntr family transcriptional regulator | BK659_23235 | Not Available | Positive | 5230449 - 5231159 | 26005.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
