Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | BK659_23140 | Not Available | Positive | 5212343 - 5213359 | 37524.0 |
| hypothetical protein | BK659_23145 | Not Available | Positive | 5213346 - 5213531 | 6903.4 |
| peroxidase | BK659_23150 | Not Available | Negative | 5213599 - 5214558 | 34749.3 |
| malonate decarboxylase subunit alpha | BK659_23155 | Not Available | Positive | 5214780 - 5216450 | 61178.9 |
| triphosphoribosyl-dephospho-coa synthase mdcb | BK659_23160 | Not Available | Positive | 5216450 - 5217325 | 30518.8 |
| malonate decarboxylase acyl carrier protein | BK659_23165 | Not Available | Positive | 5217325 - 5217624 | 10748.8 |
| biotin-independent malonate decarboxylase subunit beta | BK659_23170 | Not Available | Positive | 5217617 - 5218468 | 30098.2 |
| biotin-independent malonate decarboxylase subunit gamma | BK659_23175 | Not Available | Positive | 5218465 - 5219268 | 28488.3 |
| phosphoribosyl-dephospho-coa transferase | BK659_23180 | Not Available | Positive | 5219262 - 5219882 | 22733.5 |
| malonate decarboxylase subunit epsilon | BK659_23185 | Not Available | Positive | 5219879 - 5220799 | 32232.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
