Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease potc | BK659_23090 | Not Available | Negative | 5199876 - 5200682 | 28766.1 |
| abc transporter permease | BK659_23095 | Not Available | Negative | 5200682 - 5201602 | 33368.1 |
| spermidine/putrescine abc transporter atp-binding protein | BK659_23100 | Not Available | Negative | 5201618 - 5202736 | 40887.4 |
| lysr family transcriptional regulator | BK659_23105 | Not Available | Positive | 5202987 - 5203874 | 32962.4 |
| lysr family transcriptional regulator | BK659_23110 | Not Available | Negative | 5203949 - 5204839 | 32892.6 |
| molybdenum cofactor biosynthesis protein b | BK659_23115 | Not Available | Positive | 5205144 - 5205683 | 19135.0 |
| bestrophin | BK659_23120 | Not Available | Negative | 5206070 - 5206969 | 33570.1 |
| cyclic pyranopterin phosphate synthase moaa | BK659_23125 | Not Available | Negative | 5207014 - 5208012 | 37439.5 |
| cbbbc protein | BK659_23130 | Not Available | Positive | 5208450 - 5210774 | 85557.4 |
| cytochrome ubiquinol oxidase subunit i | BK659_23135 | Not Available | Positive | 5210906 - 5212327 | 52223.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
