Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | BK659_23040 | Not Available | Positive | 5190368 - 5191048 | 25313.6 |
| toxin-antitoxin system protein | BK659_23045 | Not Available | Negative | 5191057 - 5191347 | 10884.2 |
| lysr family transcriptional regulator | BK659_23050 | Not Available | Negative | 5191482 - 5192369 | 32553.2 |
| fad-dependent oxidoreductase | BK659_23055 | Not Available | Positive | 5192524 - 5193828 | 47404.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | BK659_23060 | Not Available | Positive | 5193875 - 5194963 | 39703.6 |
| methyltransferase | BK659_23065 | Not Available | Negative | 5194971 - 5195909 | 35069.0 |
| cytochrome b | BK659_23070 | Not Available | Positive | 5196107 - 5196640 | 19845.7 |
| polyisoprenoid-binding protein | BK659_23075 | Not Available | Positive | 5196658 - 5197230 | 20504.2 |
| amidase | BK659_23080 | Not Available | Negative | 5197265 - 5198740 | 53574.0 |
| spermidine/putrescine abc transporter substrate-binding protein | BK659_23085 | Not Available | Negative | 5198802 - 5199848 | 38473.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
