Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | BK659_22990 | Not Available | Negative | 5178660 - 5179424 | 27196.9 |
| fructose-bisphosphate aldolase | BK659_22995 | Not Available | Negative | 5179827 - 5180117 | 10766.8 |
| amidase | BK659_23000 | Not Available | Negative | 5180702 - 5182408 | 60353.5 |
| cytosine permease | BK659_23005 | Not Available | Negative | 5182794 - 5184209 | 50101.1 |
| lysr family transcriptional regulator | BK659_23010 | Not Available | Positive | 5184623 - 5185582 | 35315.4 |
| acetylornithine deacetylase (arge) | BK659_23015 | Not Available | Negative | 5185568 - 5186719 | 41394.7 |
| fimbrial assembly protein fima | BK659_23020 | Not Available | Negative | 5186716 - 5187393 | 23699.2 |
| enamine deaminase rida | BK659_23025 | Not Available | Negative | 5187558 - 5187974 | 15397.4 |
| fad-dependent oxidoreductase | BK659_23030 | Not Available | Negative | 5188011 - 5189321 | 47873.4 |
| hypothetical protein | BK659_23035 | Not Available | Positive | 5189835 - 5190362 | 19482.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
