Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | BK659_22940 | Not Available | Positive | 5166159 - 5166707 | 20163.9 |
| diaminopimelate epimerase | BK659_22945 | Not Available | Negative | 5166935 - 5167753 | 29303.9 |
| lysr family transcriptional regulator | BK659_22950 | Not Available | Negative | 5167976 - 5168878 | 33045.2 |
| aldehyde dehydrogenase family protein | BK659_22955 | Not Available | Positive | 5169003 - 5170433 | 51729.0 |
| pyoverdine biosynthesis protein pvca | BK659_22960 | Not Available | Positive | 5170830 - 5171825 | 37751.6 |
| hydrolase | BK659_22965 | Not Available | Positive | 5171825 - 5172541 | 26118.5 |
| clavaminate synthase | BK659_22970 | Not Available | Positive | 5172569 - 5174329 | 65936.9 |
| alpha/beta hydrolase | BK659_22975 | Not Available | Negative | 5174396 - 5175304 | 32933.8 |
| hypothetical protein | BK659_22980 | Not Available | Negative | 5176008 - 5176853 | 32709.4 |
| hypothetical protein | BK659_22985 | Not Available | Negative | 5176846 - 5178198 | 50556.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
