Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | BK659_22790 | Not Available | Negative | 5132354 - 5134387 | 70590.8 |
| pilin | BK659_22795 | Not Available | Negative | 5134607 - 5134810 | 7269.13 |
| histidine kinase | BK659_22800 | Not Available | Negative | 5134849 - 5135262 | 15624.0 |
| hypothetical protein | BK659_22805 | Not Available | Negative | 5135314 - 5135517 | 7287.24 |
| flp pilus assembly protein cpab | BK659_22810 | Not Available | Positive | 5135850 - 5136794 | 33574.4 |
| pilus assembly protein | BK659_22815 | Not Available | Positive | 5136855 - 5138045 | 43102.1 |
| atpase | BK659_22820 | Not Available | Positive | 5138042 - 5139316 | 47255.5 |
| type ii secretion system protein f | BK659_22825 | Not Available | Positive | 5139335 - 5140219 | 33181.8 |
| type ii secretion system protein f | BK659_22830 | Not Available | Positive | 5140221 - 5141105 | 32727.7 |
| hypothetical protein | BK659_22835 | Not Available | Negative | 5141952 - 5142326 | 14333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
