Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bile acid:sodium symporter | BK659_22740 | Not Available | Positive | 5121880 - 5122908 | 36834.2 |
| acetyl-coa acetyltransferase | BK659_22745 | Not Available | Negative | 5122895 - 5124172 | 45438.9 |
| 3-oxoacyl-acp reductase | BK659_22750 | Not Available | Positive | 5124466 - 5125818 | 47373.9 |
| acyl dehydratase | BK659_22755 | Not Available | Positive | 5125821 - 5126675 | 31361.2 |
| hypothetical protein | BK659_22760 | Not Available | Negative | 5126681 - 5127130 | 15883.1 |
| dna-binding protein | BK659_22765 | Not Available | Negative | 5127485 - 5128204 | 26811.4 |
| n-acyl-l-homoserine lactone synthetase | BK659_22770 | Not Available | Positive | 5128359 - 5128910 | 20468.2 |
| a-factor biosynthesis protein | BK659_22775 | Not Available | Positive | 5129095 - 5130342 | 47212.8 |
| nadh:flavin oxidoreductase | BK659_22780 | Not Available | Positive | 5130339 - 5131487 | 41842.4 |
| alcohol dehydrogenase | BK659_22785 | Not Available | Positive | 5131499 - 5132269 | 27013.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
