Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BK659_22640 | Not Available | Positive | 5099995 - 5100645 | 24391.2 |
| thymidylate synthase | BK659_22645 | Not Available | Positive | 5100657 - 5101238 | 20749.9 |
| hypothetical protein | BK659_22650 | Not Available | Negative | 5101738 - 5102172 | 16068.6 |
| merr family transcriptional regulator | BK659_22655 | Not Available | Positive | 5102256 - 5102606 | 13014.6 |
| short-chain dehydrogenase | BK659_22660 | Not Available | Positive | 5102632 - 5103318 | 24039.0 |
| 8-oxoguanine deaminase | BK659_22665 | Not Available | Positive | 5103577 - 5104935 | 48851.9 |
| adenosine deaminase | BK659_22670 | Not Available | Positive | 5105105 - 5106058 | 36140.0 |
| mfs transporter | BK659_22675 | Not Available | Negative | 5106193 - 5107575 | 50294.5 |
| transcriptional regulator | BK659_22680 | Not Available | Negative | 5107711 - 5108445 | 26142.7 |
| lysr family transcriptional regulator | BK659_22685 | Not Available | Negative | 5108762 - 5109691 | 34112.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
