Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK659_22590 | Not Available | Positive | 5084704 - 5085666 | 36181.2 |
| transcriptional regulator | BK659_22595 | Not Available | Negative | 5086044 - 5086910 | 31165.9 |
| diguanylate cyclase | BK659_22600 | Not Available | Negative | 5087146 - 5090016 | 107269.0 |
| dna helicase ii | BK659_22605 | Not Available | Positive | 5090277 - 5092460 | 81112.6 |
| transporter | BK659_22610 | Not Available | Positive | 5092632 - 5093072 | 15542.4 |
| hypothetical protein | BK659_22615 | Not Available | Positive | 5093251 - 5094111 | 30600.6 |
| is4 family transposase | BK659_22620 | Not Available | Negative | 5094210 - 5095330 | 42523.1 |
| methylmalonate-semialdehyde dehydrogenase (acylating) | BK659_22625 | Not Available | Negative | 5095908 - 5097401 | 53297.2 |
| aspartate aminotransferase family protein | BK659_22630 | Not Available | Negative | 5097477 - 5098826 | 48617.2 |
| lysr family transcriptional regulator | BK659_22635 | Not Available | Positive | 5098965 - 5099885 | 34156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
