Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter substrate-binding protein | BK659_22540 | Not Available | Positive | 5064097 - 5065212 | 41235.6 |
| hypothetical protein | BK659_22545 | Not Available | Positive | 5065370 - 5069995 | 172366.0 |
| hypothetical protein | BK659_22550 | Not Available | Positive | 5070125 - 5074708 | 170249.0 |
| gntr family transcriptional regulator | BK659_22555 | Not Available | Negative | 5074742 - 5076292 | 55814.9 |
| transcriptional regulator | BK659_22560 | Not Available | Positive | 5076397 - 5077026 | 22871.1 |
| gnat family n-acetyltransferase | BK659_22565 | Not Available | Positive | 5077029 - 5077475 | 16968.2 |
| gnat family n-acetyltransferase | BK659_22570 | Not Available | Positive | 5077493 - 5078164 | 25036.5 |
| hypothetical protein | BK659_22575 | Not Available | Positive | 5078945 - 5081200 | 79561.7 |
| oxaloacetate decarboxylase subunit alpha | BK659_22580 | Not Available | Negative | 5081279 - 5083087 | 65522.9 |
| pyruvate carboxylase subunit a | BK659_22585 | Not Available | Negative | 5083099 - 5084514 | 51896.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
