Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mangotoxin biosynthesis-involved protein mgob | BK659_22335 | Not Available | Positive | 5016623 - 5017399 | 29020.5 |
| aminobenzoate oxygenase | BK659_22340 | Not Available | Positive | 5017396 - 5018325 | 35129.1 |
| peptide transporter | BK659_22345 | Not Available | Positive | 5018340 - 5021801 | 127559.0 |
| mxad family protein | BK659_22350 | Not Available | Positive | 5021831 - 5022298 | 16762.0 |
| chemotaxis protein | BK659_22355 | Not Available | Negative | 5022438 - 5024318 | 67050.8 |
| type iv secretion protein rhs | BK659_22365 | Not Available | Positive | 5024886 - 5028620 | 140648.0 |
| hypothetical protein | BK659_22370 | Not Available | Positive | 5028620 - 5029210 | 22843.2 |
| hypothetical protein | BK659_22375 | Not Available | Positive | 5029453 - 5030064 | 22647.9 |
| integration host factor | BK659_22380 | Not Available | Negative | 5030689 - 5030964 | 9820.86 |
| fad-dependent oxidoreductase | BK659_22385 | Not Available | Negative | 5031154 - 5032302 | 40280.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
