Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter substrate-binding protein | BK659_22255 | Not Available | Negative | 4987449 - 4988474 | 37119.1 |
| taurine dioxygenase | BK659_22260 | Not Available | Negative | 4988501 - 4989397 | 33500.9 |
| hemolysin secretion protein d | BK659_22265 | Not Available | Negative | 4989717 - 4991084 | 50643.4 |
| abc transporter | BK659_22270 | Not Available | Negative | 4991074 - 4993230 | 78773.0 |
| channel protein tolc | BK659_22275 | Not Available | Negative | 4993268 - 4994620 | 49715.7 |
| tryptophan synthase subunit beta | BK659_22310 | Not Available | Positive | 5010978 - 5011316 | 12424.8 |
| hypothetical protein | BK659_22315 | Not Available | Negative | 5011497 - 5013443 | 71777.5 |
| hypothetical protein | BK659_22320 | Not Available | Negative | 5013458 - 5014150 | 26281.7 |
| gntr family transcriptional regulator | BK659_22325 | Not Available | Positive | 5014425 - 5015135 | 26367.8 |
| thioesterase | BK659_22330 | Not Available | Positive | 5015153 - 5015884 | 27273.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
