Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BK659_22055 | Not Available | Negative | 4939642 - 4940640 | 38084.6 |
| fatty acid hydroxylase | BK659_22060 | Not Available | Positive | 4940710 - 4941585 | 33087.7 |
| plasmid stabilization protein | BK659_22065 | Not Available | Negative | 4941956 - 4942264 | 11780.4 |
| prevent-host-death protein | BK659_22070 | Not Available | Negative | 4942261 - 4942560 | 10810.7 |
| hypothetical protein | BK659_22075 | Not Available | Positive | 4942753 - 4943352 | 22905.0 |
| hypothetical protein | BK659_22080 | Not Available | Negative | 4943357 - 4943536 | 6796.85 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | BK659_22085 | Not Available | Negative | 4943659 - 4944180 | 19774.3 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | BK659_22090 | Not Available | Negative | 4944177 - 4945535 | 51560.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase | BK659_22095 | Not Available | Negative | 4945537 - 4947534 | 74328.5 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | BK659_22100 | Not Available | Negative | 4947547 - 4950027 | 91466.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
