Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | BK659_22005 | Not Available | Negative | 4928930 - 4930849 | 71818.3 |
| acyl-coa desaturase | BK659_22010 | Not Available | Positive | 4930997 - 4932175 | 45027.8 |
| diguanylate cyclase | BK659_22015 | Not Available | Positive | 4932321 - 4933310 | 37267.0 |
| histidine kinase | BK659_22020 | Not Available | Negative | 4933450 - 4934664 | 44644.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | BK659_22025 | Not Available | Negative | 4934801 - 4936078 | 44865.6 |
| succinate-semialdehyde dehydrogenase i | BK659_22030 | Not Available | Negative | 4936255 - 4937697 | 51491.1 |
| Trna-arg | Not Available | Not Available | Positive | 4938047 - 4938123 | Not Available |
| hypothetical protein | BK659_22040 | Not Available | Negative | 4938175 - 4938612 | 16073.1 |
| hypothetical protein | BK659_22045 | Not Available | Positive | 4938664 - 4939164 | 17556.1 |
| hypothetical protein | BK659_22050 | Not Available | Positive | 4939177 - 4939419 | 8573.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
