Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase | BK659_21955 | Not Available | Negative | 4920304 - 4921377 | 40818.8 |
| arac family transcriptional regulator | BK659_21960 | Not Available | Positive | 4921478 - 4922482 | 37782.8 |
| response regulator | BK659_21965 | Not Available | Negative | 4922636 - 4923001 | 13620.6 |
| crp/fnr family transcriptional regulator | BK659_21970 | Not Available | Negative | 4923090 - 4923776 | 25647.7 |
| hypothetical protein | BK659_21975 | Not Available | Positive | 4923862 - 4924386 | 18879.5 |
| sulfate abc transporter atp-binding protein | BK659_21980 | Not Available | Negative | 4924489 - 4925478 | 36850.1 |
| sulfate abc transporter permease subunit cysw | BK659_21985 | Not Available | Negative | 4925482 - 4926354 | 31454.1 |
| sulfate abc transporter permease subunit cyst | BK659_21990 | Not Available | Negative | 4926368 - 4927186 | 29348.2 |
| abc transporter permease | BK659_21995 | Not Available | Negative | 4927364 - 4928377 | 36791.5 |
| duf2292 domain-containing protein | BK659_22000 | Not Available | Negative | 4928526 - 4928708 | 6722.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
