Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | BK659_21905 | Not Available | Negative | 4911058 - 4912158 | 38408.1 |
| atp-binding protein | BK659_21910 | Not Available | Positive | 4912423 - 4913583 | 42494.1 |
| glutamine abc transporter substrate-binding protein | BK659_21915 | Not Available | Negative | 4913686 - 4914570 | 32217.5 |
| glutamine abc transporter atp-binding protein | BK659_21920 | Not Available | Negative | 4914567 - 4915349 | 29186.8 |
| glutamine abc transporter permease | BK659_21925 | Not Available | Negative | 4915346 - 4916005 | 24074.1 |
| polar amino acid abc transporter permease | BK659_21930 | Not Available | Negative | 4915986 - 4916651 | 24265.6 |
| hypothetical protein | BK659_21935 | Not Available | Positive | 4916799 - 4917029 | 8590.7 |
| methionine abc transporter substrate-binding protein | BK659_21940 | Not Available | Negative | 4917180 - 4917962 | 28086.2 |
| fis family transcriptional regulator | BK659_21945 | Not Available | Negative | 4918202 - 4919134 | 33826.4 |
| alpha/beta hydrolase | BK659_21950 | Not Available | Negative | 4919191 - 4919772 | 21325.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
