Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n5,n10-methylene tetrahydromethanopterin reductase | BK659_21855 | Not Available | Positive | 4893117 - 4894484 | 51130.3 |
| methionine abc transporter substrate-binding protein | BK659_21860 | Not Available | Positive | 4894614 - 4895423 | 29067.2 |
| abc transporter | BK659_21865 | Not Available | Positive | 4895426 - 4896550 | 41127.0 |
| abc transporter permease | BK659_21870 | Not Available | Positive | 4896540 - 4897184 | 22917.9 |
| type iv secretion protein rhs | BK659_21875 | Not Available | Negative | 4897296 - 4900115 | 103848.0 |
| hypothetical protein | BK659_21880 | Not Available | Negative | 4900210 - 4903071 | 104961.0 |
| hypothetical protein | BK659_21885 | Not Available | Negative | 4903209 - 4906205 | 111468.0 |
| sam-dependent methyltransferase | BK659_21890 | Not Available | Positive | 4906204 - 4906833 | 23520.7 |
| acr family transporter | BK659_21895 | Not Available | Negative | 4906941 - 4909994 | 111863.0 |
| efflux transporter periplasmic adaptor subunit | BK659_21900 | Not Available | Negative | 4909991 - 4911061 | 38385.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
