Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK659_21500 | Not Available | Positive | 4815919 - 4816821 | 32564.5 |
| glutathione s-transferase | BK659_21505 | Not Available | Positive | 4816952 - 4817575 | 22266.0 |
| fad-binding oxidoreductase | BK659_21510 | Not Available | Positive | 4817638 - 4819668 | 74464.8 |
| glycosyl transferase family 1 | BK659_21515 | Not Available | Negative | 4819747 - 4820877 | 42520.3 |
| glycosyl transferase | BK659_21520 | Not Available | Negative | 4820878 - 4822008 | 41654.2 |
| glycosyl transferase | BK659_21525 | Not Available | Negative | 4821992 - 4823359 | 52099.0 |
| sugar abc transporter atp-binding protein | BK659_21530 | Not Available | Negative | 4823356 - 4824609 | 46108.5 |
| abc transporter | BK659_21535 | Not Available | Negative | 4824609 - 4825406 | 30170.3 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BK659_21540 | Not Available | Negative | 4825407 - 4826849 | 52417.2 |
| gdp-mannose 4,6-dehydratase | BK659_21545 | Not Available | Negative | 4826853 - 4827824 | 36234.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
