Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | BK659_21250 | Not Available | Negative | 4757948 - 4758769 | 29191.0 |
| coproporphyrinogen iii oxidase | BK659_21255 | Not Available | Negative | 4758874 - 4759782 | 34271.0 |
| quinone oxidoreductase | BK659_21260 | Not Available | Positive | 4759962 - 4760939 | 34355.2 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | BK659_21265 | Not Available | Negative | 4761073 - 4761630 | 20722.0 |
| dna protecting protein dpra | BK659_21270 | Not Available | Negative | 4761682 - 4762785 | 38734.6 |
| peptidoglycan-binding protein | BK659_21275 | Not Available | Negative | 4762866 - 4763891 | 37416.1 |
| peptide deformylase | BK659_21280 | Not Available | Positive | 4764063 - 4764569 | 19367.4 |
| methionyl-trna formyltransferase | BK659_21285 | Not Available | Positive | 4764636 - 4765595 | 33988.2 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase | BK659_21290 | Not Available | Positive | 4765592 - 4766902 | 47325.1 |
| trk system potassium transport protein trka | BK659_21295 | Not Available | Positive | 4766926 - 4768299 | 49763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
