Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | BK659_21100 | Not Available | Negative | 4730109 - 4731704 | 58976.4 |
| cytochrome c oxidase subunit ii | BK659_21105 | Not Available | Negative | 4731787 - 4732914 | 41991.8 |
| hypothetical protein | BK659_21110 | Not Available | Positive | 4733288 - 4733938 | 23997.5 |
| sulp family inorganic anion transporter | BK659_21115 | Not Available | Negative | 4734030 - 4735571 | 53462.4 |
| carbonate dehydratase | BK659_21120 | Not Available | Negative | 4735661 - 4736392 | 26593.9 |
| radical sam protein | BK659_21125 | Not Available | Negative | 4736637 - 4737695 | 39503.7 |
| hypothetical protein | BK659_21130 | Not Available | Positive | 4737960 - 4738262 | 10861.0 |
| protein tyrosine phosphatase | BK659_21135 | Not Available | Positive | 4738647 - 4739303 | 24217.1 |
| dna-binding protein | BK659_21140 | Not Available | Negative | 4739440 - 4739730 | 10531.6 |
| oligopeptidase a | BK659_21145 | Not Available | Negative | 4739727 - 4741778 | 75664.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
