Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter permease | BK659_21050 | Not Available | Positive | 4722688 - 4723362 | 23955.4 |
| methionine abc transporter substrate-binding protein | BK659_21055 | Not Available | Positive | 4723424 - 4724197 | 27806.7 |
| cytochrome c oxidase assembly protein | BK659_21060 | Not Available | Negative | 4724303 - 4724938 | 22920.0 |
| protoheme ix farnesyltransferase | BK659_21065 | Not Available | Negative | 4724935 - 4725834 | 32661.0 |
| cytochrome b | BK659_21070 | Not Available | Negative | 4725822 - 4726901 | 39012.7 |
| hypothetical protein | BK659_21075 | Not Available | Negative | 4726912 - 4727502 | 21890.5 |
| cytochrome oxidase biogenesis protein surf1,facilitates heme a insertion | BK659_21080 | Not Available | Negative | 4727468 - 4728208 | 27907.3 |
| mfs transporter | BK659_21085 | Not Available | Positive | 4728279 - 4728482 | 7099.94 |
| cytochrome c oxidase subunit 3 | BK659_21090 | Not Available | Negative | 4728491 - 4729378 | 33322.9 |
| cytochrome c oxidase assembly protein | BK659_21095 | Not Available | Negative | 4729413 - 4729970 | 20577.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
