Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_20950 | Not Available | Negative | 4700925 - 4701212 | 10495.6 |
| sigma-54-dependent fis family transcriptional regulator | BK659_20955 | Not Available | Positive | 4701656 - 4703002 | 49502.2 |
| pas domain-containing sensor histidine kinase | BK659_20960 | Not Available | Positive | 4703013 - 4704803 | 66568.3 |
| cyclic diguanylate phosphodiesterase | BK659_20965 | Not Available | Negative | 4704811 - 4706427 | 59993.7 |
| n-acetylmuramoyl-l-alanine amidase | BK659_20970 | Not Available | Negative | 4706501 - 4707280 | 29005.6 |
| hypothetical protein | BK659_20975 | Not Available | Negative | 4707381 - 4709528 | 78594.4 |
| endonuclease | BK659_20980 | Not Available | Negative | 4709525 - 4710403 | 32541.3 |
| thiol:disulfide interchange protein | BK659_20985 | Not Available | Negative | 4710416 - 4711045 | 22632.4 |
| cytochrome c4 | BK659_20990 | Not Available | Negative | 4711246 - 4711851 | 20840.7 |
| cytochrome c5 family protein | BK659_20995 | Not Available | Negative | 4711898 - 4712188 | 10579.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
