Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_20890 | Not Available | Positive | 4688676 - 4688924 | 8962.04 |
| group ii intron reverse transcriptase/maturase | BK659_20895 | Not Available | Negative | 4688910 - 4690394 | 56070.2 |
| hypothetical protein | BK659_20900 | Not Available | Negative | 4690988 - 4691338 | 13267.0 |
| udp-n-acetylglucosamine 2-epimerase | BK659_20910 | Not Available | Positive | 4693149 - 4694279 | 42734.7 |
| glycosyltransferase wbub | BK659_20915 | Not Available | Positive | 4694285 - 4695511 | 45447.3 |
| sugar transferase | BK659_20920 | Not Available | Positive | 4695569 - 4696165 | 22508.8 |
| acetyltransferase | BK659_20925 | Not Available | Positive | 4696162 - 4696788 | 21082.5 |
| aminotransferase | BK659_20930 | Not Available | Positive | 4696882 - 4698066 | 44085.6 |
| glutamate/aspartate:proton symporter gltp | BK659_20940 | Not Available | Negative | 4698760 - 4700091 | 47803.9 |
| duf1328 domain-containing protein | BK659_20945 | Not Available | Negative | 4700687 - 4700851 | 5696.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
