Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-amino-4,6-dideoxygalactose transaminase | BK659_20840 | Not Available | Positive | 4677968 - 4679098 | 42514.2 |
| o-antigen translocase | BK659_20845 | Not Available | Positive | 4679126 - 4680388 | 46559.9 |
| hypothetical protein | BK659_20850 | Not Available | Positive | 4680372 - 4681637 | 47106.9 |
| hypothetical protein | BK659_20855 | Not Available | Positive | 4681700 - 4682653 | 36212.2 |
| udp-glucose 4-epimerase | BK659_20860 | Not Available | Positive | 4682828 - 4683868 | 38801.7 |
| capsular biosynthesis protein | BK659_20865 | Not Available | Positive | 4683872 - 4684990 | 41469.3 |
| transposase | BK659_20870 | Not Available | Positive | 4685244 - 4685372 | 4824.03 |
| hypothetical protein | BK659_20875 | Not Available | Negative | 4685486 - 4685800 | 11725.3 |
| is66 family transposase | BK659_20880 | Not Available | Negative | 4685784 - 4687319 | 58390.1 |
| transposase | BK659_20885 | Not Available | Negative | 4687338 - 4687697 | 14027.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
