Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | BK659_20790 | Not Available | Positive | 4666341 - 4667453 | 39756.6 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | BK659_20795 | Not Available | Positive | 4667482 - 4669689 | 77942.3 |
| cytidylate kinase | BK659_20800 | Not Available | Positive | 4669686 - 4670375 | 24794.8 |
| 30s ribosomal protein s1 | BK659_20805 | Not Available | Positive | 4670497 - 4672188 | 62406.1 |
| hypothetical protein | BK659_20810 | Not Available | Positive | 4672385 - 4672666 | 10118.2 |
| integration host factor subunit beta | BK659_20815 | Not Available | Positive | 4672827 - 4673123 | 11042.3 |
| hypothetical protein | BK659_20820 | Not Available | Positive | 4673148 - 4673384 | 8741.45 |
| dtdp-glucose 4,6-dehydratase | BK659_20825 | Not Available | Positive | 4673614 - 4674690 | 40556.5 |
| chain-length determining protein | BK659_20830 | Not Available | Positive | 4675024 - 4676091 | 39463.5 |
| glucose-1-phosphate thymidylyltransferase | BK659_20835 | Not Available | Positive | 4676477 - 4677358 | 32521.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
