Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | BK659_20690 | Not Available | Positive | 4642524 - 4643708 | 42234.7 |
| hypothetical protein | BK659_20695 | Not Available | Negative | 4643821 - 4644021 | 7675.96 |
| eama family transporter | BK659_20700 | Not Available | Positive | 4644233 - 4645195 | 34889.2 |
| class ii fumarate hydratase | BK659_20705 | Not Available | Negative | 4645319 - 4646713 | 49210.9 |
| hypothetical protein | BK659_20710 | Not Available | Positive | 4646905 - 4647429 | 18963.0 |
| bola family transcriptional regulator | BK659_20715 | Not Available | Positive | 4647443 - 4647742 | 10792.8 |
| hypothetical protein | BK659_20720 | Not Available | Positive | 4647846 - 4648787 | 35486.0 |
| disulfide bond formation protein dsba | BK659_20725 | Not Available | Positive | 4648791 - 4649426 | 22918.4 |
| abc transporter atp-binding protein | BK659_20730 | Not Available | Positive | 4649419 - 4651236 | 66225.0 |
| pas domain s-box protein | BK659_20735 | Not Available | Positive | 4651448 - 4653907 | 90835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
