Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_20640 | Not Available | Positive | 4632287 - 4632817 | 18868.7 |
| hypothetical protein | BK659_20645 | Not Available | Positive | 4632906 - 4633097 | 6753.86 |
| spermidine synthase | BK659_20650 | Not Available | Positive | 4633330 - 4634205 | 32746.2 |
| hypothetical protein | BK659_20655 | Not Available | Positive | 4634521 - 4636614 | 77821.4 |
| short chain dehydrogenase | BK659_20660 | Not Available | Positive | 4636833 - 4637660 | 29890.3 |
| hypothetical protein | BK659_20665 | Not Available | Positive | 4637713 - 4638045 | 12277.3 |
| carbon storage regulator | BK659_20670 | Not Available | Positive | 4638187 - 4638372 | 6781.31 |
| hypothetical protein | BK659_20675 | Not Available | Negative | 4638378 - 4638605 | 8637.33 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | BK659_20680 | Not Available | Negative | 4638763 - 4640757 | 72646.4 |
| polyphosphate:amp phosphotransferase | BK659_20685 | Not Available | Positive | 4640897 - 4642420 | 59124.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
