Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | BK659_20590 | Not Available | Negative | 4622957 - 4623922 | 34300.9 |
| chorismate synthase | BK659_20595 | Not Available | Positive | 4624062 - 4625153 | 39080.6 |
| mfs transporter | BK659_20600 | Not Available | Positive | 4625188 - 4626333 | 42028.3 |
| methylthioribulose-1-phosphate dehydratase | BK659_20605 | Not Available | Positive | 4626330 - 4626950 | 23020.4 |
| acireductone dioxygenase | BK659_20610 | Not Available | Positive | 4627050 - 4627595 | 20513.1 |
| 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | BK659_20615 | Not Available | Positive | 4627600 - 4628283 | 24779.3 |
| helix-turn-helix transcriptional regulator | BK659_20620 | Not Available | Positive | 4628529 - 4628795 | 9774.95 |
| hypothetical protein | BK659_20625 | Not Available | Negative | 4628864 - 4629142 | 10322.2 |
| long-chain-acyl-coa synthetase | BK659_20630 | Not Available | Positive | 4629549 - 4631387 | 67375.7 |
| hypothetical protein | BK659_20635 | Not Available | Positive | 4631485 - 4632003 | 17995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
