Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis lauroyl acyltransferase | BK659_20490 | Not Available | Positive | 4603861 - 4604793 | 35742.6 |
| patatin | BK659_20495 | Not Available | Positive | 4604844 - 4606016 | 41173.7 |
| quercetin 2,3-dioxygenase | BK659_20500 | Not Available | Negative | 4606151 - 4607005 | 31183.2 |
| hypothetical protein | BK659_20505 | Not Available | Negative | 4607204 - 4607989 | 29917.0 |
| purine permease | BK659_20510 | Not Available | Negative | 4608504 - 4609862 | 47168.8 |
| hypothetical protein | BK659_20515 | Not Available | Negative | 4610015 - 4611322 | 47045.4 |
| ureidoglycolate hydrolase | BK659_20520 | Not Available | Negative | 4611373 - 4611876 | 18648.3 |
| allantoicase | BK659_20525 | Not Available | Negative | 4612005 - 4613000 | 36692.3 |
| ohcu decarboxylase | BK659_20530 | Not Available | Negative | 4613089 - 4613604 | 18968.5 |
| allantoinase | BK659_20535 | Not Available | Negative | 4613601 - 4614527 | 35576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
