Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide pyrophosphatase | BK659_20440 | Not Available | Negative | 4592134 - 4592940 | 29949.4 |
| abc transporter substrate-binding protein | BK659_20445 | Not Available | Negative | 4593126 - 4594202 | 38199.4 |
| phosphonate utilization transcriptional regulator phnr | BK659_20450 | Not Available | Positive | 4594564 - 4595277 | 26909.4 |
| mechanosensitive ion channel protein | BK659_20455 | Not Available | Negative | 4595797 - 4597953 | 79545.7 |
| m18 family aminopeptidase | BK659_20460 | Not Available | Negative | 4598367 - 4599656 | 47067.9 |
| hypothetical protein | BK659_20465 | Not Available | Negative | 4599748 - 4600854 | 42699.3 |
| rna pseudouridine synthase | BK659_20470 | Not Available | Negative | 4600912 - 4601547 | 24066.9 |
| cell division topological specificity factor mine | BK659_20475 | Not Available | Negative | 4601734 - 4601988 | 9511.44 |
| septum site-determining protein mind | BK659_20480 | Not Available | Negative | 4601988 - 4602800 | 29374.4 |
| septum site-determining protein minc | BK659_20485 | Not Available | Negative | 4603002 - 4603739 | 26316.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
