Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_20390 | Not Available | Positive | 4577653 - 4578054 | 14757.9 |
| type iv secretion protein rhs | BK659_20395 | Not Available | Positive | 4578285 - 4583147 | 182546.0 |
| hypothetical protein | BK659_20400 | Not Available | Positive | 4583151 - 4583549 | 15273.1 |
| diguanylate phosphodiesterase | BK659_20405 | Not Available | Negative | 4583630 - 4585405 | 65927.2 |
| tail-specific protease | BK659_20410 | Not Available | Negative | 4585533 - 4587653 | 79006.5 |
| nad(p)h-quinone oxidoreductase | BK659_20415 | Not Available | Positive | 4587759 - 4588721 | 33671.7 |
| had family hydrolase | BK659_20420 | Not Available | Negative | 4588807 - 4589460 | 24452.1 |
| spermidine/putrescine abc transporter atp-binding protein | BK659_20425 | Not Available | Negative | 4589504 - 4590508 | 36698.4 |
| abc transporter permease | BK659_20430 | Not Available | Negative | 4590505 - 4591305 | 29403.7 |
| abc transporter permease | BK659_20435 | Not Available | Negative | 4591292 - 4592137 | 31147.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
