Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | BK659_20235 | Not Available | Positive | 4544016 - 4544327 | 11511.7 |
| c4-dicarboxylate abc transporter | BK659_20240 | Not Available | Positive | 4544434 - 4545585 | 41558.9 |
| glycerol acyltransferase | BK659_20245 | Not Available | Positive | 4545670 - 4547544 | 68738.2 |
| qace family quaternary ammonium compound efflux smr transporter | BK659_20250 | Not Available | Negative | 4547666 - 4547980 | 10739.7 |
| sodium transporter | BK659_20255 | Not Available | Negative | 4548099 - 4549064 | 34387.2 |
| recombination-associated protein rdgc | BK659_20260 | Not Available | Negative | 4549198 - 4550118 | 34189.2 |
| Trna-val | Not Available | Not Available | Positive | 4550279 - 4550354 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4550374 - 4550450 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 4550637 - 4550712 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4550732 - 4550808 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
