Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | BK659_20135 | Not Available | Positive | 4522050 - 4522661 | 22544.3 |
| cobyrinic acid a,c-diamide synthase | BK659_20140 | Not Available | Positive | 4522672 - 4524009 | 47238.9 |
| 5,6-dimethylbenzimidazole synthase | BK659_20145 | Not Available | Positive | 4524006 - 4524656 | 24337.4 |
| cobalamin biosynthesis protein | BK659_20150 | Not Available | Positive | 4524653 - 4525561 | 32978.7 |
| threonine-phosphate decarboxylase | BK659_20155 | Not Available | Positive | 4525554 - 4526546 | 36957.4 |
| cobyric acid synthase cobq | BK659_20160 | Not Available | Positive | 4526543 - 4527994 | 51785.2 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | BK659_20165 | Not Available | Positive | 4528146 - 4528667 | 18919.1 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | BK659_20170 | Not Available | Positive | 4528664 - 4529719 | 36392.9 |
| histidine phosphatase family protein | BK659_20175 | Not Available | Positive | 4529716 - 4530291 | 20911.1 |
| adenosylcobinamide-gdp ribazoletransferase | BK659_20180 | Not Available | Positive | 4530294 - 4531025 | 25802.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
