Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | BK659_20085 | Not Available | Negative | 4512741 - 4513454 | 26264.4 |
| phosphoribosylglycinamide formyltransferase | BK659_20090 | Not Available | Negative | 4513463 - 4514113 | 23663.3 |
| phosphoribosylformylglycinamidine cyclo-ligase | BK659_20095 | Not Available | Negative | 4514125 - 4515183 | 36892.7 |
| hypothetical protein | BK659_20100 | Not Available | Positive | 4515570 - 4516625 | 37260.1 |
| ai-2e family transporter | BK659_20105 | Not Available | Positive | 4516661 - 4517731 | 38577.9 |
| dnaa regulatory inactivator hda | BK659_20110 | Not Available | Positive | 4517965 - 4518669 | 26499.2 |
| peptidase p60 | BK659_20115 | Not Available | Positive | 4518883 - 4519503 | 22591.0 |
| peptidase p60 | BK659_20120 | Not Available | Positive | 4519669 - 4520202 | 18744.5 |
| sam-dependent methyltransferase | BK659_20125 | Not Available | Positive | 4520218 - 4520880 | 24336.2 |
| hypothetical protein | BK659_20130 | Not Available | Negative | 4520990 - 4521574 | 22251.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
