Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | DSM 17526 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | ECHVI_RS22225 | Not Available | Negative | 5462529 - 5465948 | 126868.0 |
| fecr family protein | ECHVI_RS22230 | Not Available | Negative | 5466077 - 5467051 | 36373.5 |
| rna polymerase sigma factor | ECHVI_RS22235 | Not Available | Negative | 5467143 - 5467706 | 22407.8 |
| tonb-dependent receptor | ECHVI_RS22240 | Not Available | Positive | 5468049 - 5470421 | 89648.0 |
| duf4374 domain-containing protein | ECHVI_RS22245 | Not Available | Positive | 5470434 - 5471663 | 44408.2 |
| pepsy-associated tm helix domain-containing protein | ECHVI_RS22250 | Not Available | Positive | 5471746 - 5472960 | 46343.7 |
| peroxiredoxin family protein | ECHVI_RS22255 | Not Available | Positive | 5473043 - 5474152 | 42736.8 |
| pas domain s-box protein | ECHVI_RS22260 | Not Available | Positive | 5474796 - 5478725 | 148595.0 |
| glycosyltransferase | ECHVI_RS22265 | Not Available | Negative | 5479295 - 5480080 | 30197.0 |
| sigma-54-dependent transcriptional regulator | ECHVI_RS22270 | Not Available | Positive | 5480313 - 5481665 | 51497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
