Echinicola vietnamensis DSM 17526

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola vietnamensis DSM 17526 is a Gram-negative bacterium that thrives optimally at a temperature of 32.0 °C. This microbe, part of the diverse group of Echinicola species, is characterized by its distinctive cellular structure, which is typical of Gram-negative organisms, exhibiting a thin peptidoglycan layer surrounded by an outer membrane. The optimal growth temperature suggests that E. vietnamensis is likely adapted to moderate thermal environments, potentially indicative of its natural habitat. The physiological traits of Echinicola vietnamensis may provide insights into its ecological role, possibly linking it to specific environmental conditions or niches where similar temperature ranges are prevalent. Given the optimal growth temperature, it may play a significant role in microbial communities within aquatic or sediment environments that maintain temperatures around 32.0 °C. This bacterium's adaptation to a defined thermal niche highlights the importance of temperature in shaping microbial diversity and community structure. Understanding such traits can enhance our knowledge of microbial ecology and the functional roles these organisms play in their environments, particularly in relation to nutrient cycling and interactions within microbial consortia. Further research on Echinicola vietnamensis could elucidate its contributions to ecosystem dynamics and microbial interactions in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola vietnamensis
StrainDSM 17526

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Echinicola vietnamensis DSM 17526, complete sequence.

Gene Summary

Adenine Count

1529331 bp

Thymine Count

1568904 bp

Guanine Count

1256580 bp

Cytosine Count

1253225 bp

Genome Length

5608040 bp

Protein-coding Genes

4441 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma-70 factorECHVI_RS19075Not AvailablePositive4700547 - 470112222494.4
peptide-methionine (s)-s-oxide reductase msraECHVI_RS19080Not AvailablePositive4701295 - 470191223173.7
peptide-methionine (r)-s-oxide reductase msrbECHVI_RS19085Not AvailablePositive4702017 - 470252919128.7
sdr family oxidoreductaseECHVI_RS19090Not AvailableNegative4702693 - 470333722897.7
sdr family nad(p)-dependent oxidoreductaseECHVI_RS19095Not AvailablePositive4703628 - 470438626462.8
tetr/acrr family transcriptional regulatorECHVI_RS19100Not AvailablePositive4704482 - 470506322332.5
alpha-l-fucosidaseECHVI_RS19105Not AvailableNegative4705149 - 470661556681.4
family 20 glycosylhydrolaseECHVI_RS19110Not AvailableNegative4706850 - 470797443030.0
heparan-alpha-glucosaminide n-acetyltransferase domain-containing proteinECHVI_RS19115Not AvailableNegative4707983 - 470922146475.4
sulfataseECHVI_RS19120Not AvailableNegative4709502 - 471112459908.5

Displaying genes 3721 – 3730 of 4441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.