Echinicola vietnamensis DSM 17526

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola vietnamensis DSM 17526 is a Gram-negative bacterium that thrives optimally at a temperature of 32.0 °C. This microbe, part of the diverse group of Echinicola species, is characterized by its distinctive cellular structure, which is typical of Gram-negative organisms, exhibiting a thin peptidoglycan layer surrounded by an outer membrane. The optimal growth temperature suggests that E. vietnamensis is likely adapted to moderate thermal environments, potentially indicative of its natural habitat. The physiological traits of Echinicola vietnamensis may provide insights into its ecological role, possibly linking it to specific environmental conditions or niches where similar temperature ranges are prevalent. Given the optimal growth temperature, it may play a significant role in microbial communities within aquatic or sediment environments that maintain temperatures around 32.0 °C. This bacterium's adaptation to a defined thermal niche highlights the importance of temperature in shaping microbial diversity and community structure. Understanding such traits can enhance our knowledge of microbial ecology and the functional roles these organisms play in their environments, particularly in relation to nutrient cycling and interactions within microbial consortia. Further research on Echinicola vietnamensis could elucidate its contributions to ecosystem dynamics and microbial interactions in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola vietnamensis
StrainDSM 17526

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Echinicola vietnamensis DSM 17526, complete sequence.

Gene Summary

Adenine Count

1529331 bp

Thymine Count

1568904 bp

Guanine Count

1256580 bp

Cytosine Count

1253225 bp

Genome Length

5608040 bp

Protein-coding Genes

4441 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gliding motility-associated c-terminal domain-containing proteinECHVI_RS22925Not AvailablePositive1718630 - 172112890094.9
type ix secretion system membrane protein porp/sprfECHVI_RS07340Not AvailablePositive1721142 - 172211936109.8
ompa family proteinECHVI_RS07345Not AvailablePositive1722122 - 1724806100619.0
duf4870 domain-containing proteinECHVI_RS22930Not AvailablePositive1725254 - 172562213972.7
tspo/mbr family proteinECHVI_RS07355Not AvailablePositive1725691 - 172619719293.4
srpbcc family proteinECHVI_RS07360Not AvailablePositive1726273 - 172675518323.3
cryptochrome/photolyase family proteinECHVI_RS07365Not AvailablePositive1726757 - 172824157849.3
trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmdECHVI_RS07370Not AvailableNegative1728258 - 172894726237.3
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseECHVI_RS07375Not AvailableNegative1728949 - 172943417851.5
m16 family metallopeptidaseECHVI_RS07380Not AvailableNegative1729501 - 173074246997.9

Displaying genes 1421 – 1430 of 4441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.