Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola vietnamensis |
| Strain | DSM 17526 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1529331 bp
Thymine Count
1568904 bp
Guanine Count
1256580 bp
Cytosine Count
1253225 bp
Genome Length
5608040 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | ECHVI_RS12525 | Not Available | Negative | 3048142 - 3048657 | 20195.1 |
| m28 family metallopeptidase | ECHVI_RS12530 | Not Available | Positive | 3048726 - 3050072 | 50026.2 |
| m3 family metallopeptidase | ECHVI_RS12535 | Not Available | Positive | 3050260 - 3052290 | 76518.3 |
| arac family transcriptional regulator | ECHVI_RS12540 | Not Available | Positive | 3054013 - 3054897 | 33818.2 |
| duf4136 domain-containing protein | ECHVI_RS12545 | Not Available | Positive | 3055250 - 3055822 | 21708.8 |
| bama/tama family outer membrane protein | ECHVI_RS12550 | Not Available | Positive | 3056089 - 3057156 | 40297.8 |
| had family hydrolase | ECHVI_RS12555 | Not Available | Positive | 3057220 - 3058278 | 40368.6 |
| duf4136 domain-containing protein | ECHVI_RS12560 | Not Available | Positive | 3058339 - 3058974 | 24224.8 |
| outer membrane beta-barrel protein | ECHVI_RS12565 | Not Available | Positive | 3058986 - 3059576 | 22067.1 |
| hded family acid-resistance protein | ECHVI_RS12570 | Not Available | Positive | 3059694 - 3060263 | 21407.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
