Echinicola vietnamensis DSM 17526

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola vietnamensis DSM 17526 is a Gram-negative bacterium that thrives optimally at a temperature of 32.0 °C. This microbe, part of the diverse group of Echinicola species, is characterized by its distinctive cellular structure, which is typical of Gram-negative organisms, exhibiting a thin peptidoglycan layer surrounded by an outer membrane. The optimal growth temperature suggests that E. vietnamensis is likely adapted to moderate thermal environments, potentially indicative of its natural habitat. The physiological traits of Echinicola vietnamensis may provide insights into its ecological role, possibly linking it to specific environmental conditions or niches where similar temperature ranges are prevalent. Given the optimal growth temperature, it may play a significant role in microbial communities within aquatic or sediment environments that maintain temperatures around 32.0 °C. This bacterium's adaptation to a defined thermal niche highlights the importance of temperature in shaping microbial diversity and community structure. Understanding such traits can enhance our knowledge of microbial ecology and the functional roles these organisms play in their environments, particularly in relation to nutrient cycling and interactions within microbial consortia. Further research on Echinicola vietnamensis could elucidate its contributions to ecosystem dynamics and microbial interactions in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola vietnamensis
StrainDSM 17526

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Echinicola vietnamensis DSM 17526


Gene Summary

Adenine Count

1529331 bp

Thymine Count

1568904 bp

Guanine Count

1256580 bp

Cytosine Count

1253225 bp

Genome Length

5608040 bp

Protein-coding Genes

4441 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseECHVI_RS10890Not AvailableNegative2655467 - 265676849848.7
duf423 domain-containing proteinECHVI_RS10895Not AvailableNegative2656820 - 265720613557.9
yggs family pyridoxal phosphate-dependent enzymeECHVI_RS10900Not AvailableNegative2657267 - 265794125431.1
gh3 auxin-responsive promoter family proteinECHVI_RS10905Not AvailablePositive2658109 - 265964758873.0
lyse family translocatorECHVI_RS10910Not AvailablePositive2659652 - 266028423186.3
hypothetical proteinECHVI_RS10915Not AvailablePositive2660953 - 26611597001.59
hypothetical proteinECHVI_RS10925Not AvailablePositive2661883 - 266222712975.2
hypothetical proteinECHVI_RS10930Not AvailablePositive2662637 - 266330825651.4
glycosyltransferaseECHVI_RS10935Not AvailablePositive2663289 - 266374117393.1
peptidase domain-containing abc transporterECHVI_RS10945Not AvailablePositive2663957 - 266594573939.7

Displaying genes 2111 – 2120 of 4441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.