Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium sp. AMS5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soybean stem |
| Biotic relationship | Not Available |
| Host(s) | Glycine max |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methylobacterium sp. AMS5 plasmid pAMS5b, complete sequence.
Gene Summary
Adenine Count
4371 bp
Thymine Count
4515 bp
Guanine Count
8015 bp
Cytosine Count
8707 bp
Genome Length
25608 bp
Protein-coding Genes
30 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | Y590_RS18540 | Not Available | Positive | 4126478 - 4127041 | 19137.9 |
| protocatechuate 3,4-dioxygenase subunit beta | Y590_RS18545 | Not Available | Positive | 4127129 - 4127836 | 26272.1 |
| protocatechuate 3,4-dioxygenase subunit alpha | Y590_RS18550 | Not Available | Positive | 4127838 - 4128551 | 25229.0 |
| 3-keto-5-aminohexanoate cleavage protein | Y590_RS18555 | Not Available | Positive | 4128621 - 4129454 | 29498.2 |
| lyase family protein | Y590_RS18560 | Not Available | Positive | 4129457 - 4130815 | 45885.1 |
| 3-oxoadipate enol-lactonase | Y590_RS18565 | Not Available | Positive | 4130844 - 4132031 | 41497.0 |
| marr family winged helix-turn-helix transcriptional regulator | Y590_RS18570 | Not Available | Negative | 4132122 - 4132595 | 17096.8 |
| helix-turn-helix domain-containing protein | Y590_RS18575 | Not Available | Negative | 4132701 - 4133612 | 32998.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | Y590_RS18580 | Not Available | Positive | 4133965 - 4135047 | 39952.3 |
| pdr/vanb family oxidoreductase | Y590_RS18585 | Not Available | Positive | 4135101 - 4136069 | 34881.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
