Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium sp. AMS5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soybean stem |
| Biotic relationship | Not Available |
| Host(s) | Glycine max |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methylobacterium sp. AMS5 plasmid pAMS5b, complete sequence.
Gene Summary
Adenine Count
4371 bp
Thymine Count
4515 bp
Guanine Count
8015 bp
Cytosine Count
8707 bp
Genome Length
25608 bp
Protein-coding Genes
30 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thermonuclease family protein | Y590_RS07045 | Not Available | Positive | 1543580 - 1544890 | 45761.8 |
| phosphatase pap2 family protein | Y590_RS07050 | Not Available | Negative | 1545023 - 1545901 | 30967.2 |
| alpha/beta fold hydrolase | Y590_RS07055 | Not Available | Negative | 1546065 - 1546943 | 30751.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | Y590_RS07060 | Not Available | Negative | 1546943 - 1547785 | 29389.1 |
| crp/fnr family transcriptional regulator | Y590_RS07065 | Not Available | Negative | 1547948 - 1548415 | 16628.3 |
| response regulator transcription factor | Y590_RS07070 | Not Available | Negative | 1548601 - 1549287 | 25448.6 |
| l,d-transpeptidase | Y590_RS07075 | Not Available | Positive | 1549578 - 1550171 | 21638.4 |
| yggs family pyridoxal phosphate-dependent enzyme | Y590_RS07080 | Not Available | Negative | 1550235 - 1550966 | 26274.5 |
| duf1963 domain-containing protein | Y590_RS07085 | Not Available | Positive | 1551077 - 1552180 | 39862.1 |
| leucine--trna ligase | Y590_RS07090 | Not Available | Positive | 1552294 - 1554912 | 96964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
