Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium sp. AMS5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soybean stem |
| Biotic relationship | Not Available |
| Host(s) | Glycine max |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methylobacterium sp. AMS5 plasmid pAMS5b, complete sequence.
Gene Summary
Adenine Count
4371 bp
Thymine Count
4515 bp
Guanine Count
8015 bp
Cytosine Count
8707 bp
Genome Length
25608 bp
Protein-coding Genes
30 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapb family antitoxin | Y590_RS06110 | Not Available | Positive | 1344205 - 1344447 | 8768.68 |
| type ii toxin-antitoxin system vapc family toxin | Y590_RS06115 | Not Available | Positive | 1344448 - 1344849 | 14039.8 |
| carbohydrate porin | Y590_RS06120 | Not Available | Negative | 1344895 - 1346367 | 52445.2 |
| gntr family transcriptional regulator | Y590_RS06125 | Not Available | Negative | 1346460 - 1347131 | 24481.4 |
| trap transporter substrate-binding protein dctp | Y590_RS06130 | Not Available | Positive | 1347295 - 1348317 | 36671.4 |
| trap transporter small permease | Y590_RS06135 | Not Available | Positive | 1348314 - 1349048 | 26365.0 |
| trap transporter large permease | Y590_RS06140 | Not Available | Positive | 1349045 - 1350397 | 47775.4 |
| nepr family anti-sigma factor | Y590_RS06145 | Not Available | Positive | 1350565 - 1350762 | 7190.48 |
| hypothetical protein | Y590_RS06150 | Not Available | Positive | 1351544 - 1351777 | 7977.87 |
| cysteine synthase a | Y590_RS06155 | Not Available | Positive | 1351845 - 1352891 | 36004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
