Flammeovirga pacifica str. WPAGA1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pacifica str. WPAGA1 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 32.0°C, suggesting a mesophilic lifestyle. This microbial strain is part of the genus Flammeovirga, which is characterized by its adaptation to specific environmental conditions. The Gram-negative nature of F. pacifica str. WPAGA1 indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that is significant for its interaction with the environment and may influence its metabolic pathways and resistance to certain antibiotics. The rod shape of this bacterium is indicative of its cellular morphology, which can play a role in its motility and nutrient absorption capabilities. The optimal temperature of 32.0°C implies that F. pacifica str. WPAGA1 is likely adapted to environments with moderate thermal conditions, potentially including marine or estuarine ecosystems, where such temperatures are commonly found. Understanding the physiological traits of Flammeovirga pacifica str. WPAGA1, particularly its temperature preference and structural characteristics, may provide insights into its ecological role in nutrient cycling or its interactions with other microorganisms in its habitat. Further studies could elucidate the metabolic pathways it employs to thrive in its niche, contributing to our knowledge of microbial diversity and function in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pacifica
StrainWPAGA1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pacifica strain WPAGA1 Scaffold21, whole genome

Gene Summary

Adenine Count

2192809 bp

Thymine Count

2199848 bp

Guanine Count

1071093 bp

Cytosine Count

1082388 bp

Genome Length

6610326 bp

Protein-coding Genes

4855 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNH26_03330Not AvailablePositive826168 - 82766757208.2
deoxyuridine 5'-triphosphate nucleotidohydrolaseNH26_03335Not AvailablePositive827676 - 82811015789.0
nucleotidyltransferaseNH26_03340Not AvailablePositive828130 - 82913436801.9
hypothetical proteinNH26_03345Not AvailablePositive829328 - 83109468367.1
hypothetical proteinNH26_03350Not AvailableNegative831124 - 83216440943.2
cell division protein ftshNH26_03355Not AvailablePositive832488 - 83447373285.6
hypothetical proteinNH26_03360Not AvailablePositive834466 - 8346908787.74
phenylalanine 4-monooxygenaseNH26_03365Not AvailablePositive834787 - 83553629186.0
hypothetical proteinNH26_03370Not AvailableNegative835542 - 83597017133.9
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase iiNH26_03375Not AvailableNegative836075 - 83729244616.0

Displaying genes 661 – 670 of 4943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.