Flammeovirga pacifica str. WPAGA1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pacifica str. WPAGA1 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 32.0°C, suggesting a mesophilic lifestyle. This microbial strain is part of the genus Flammeovirga, which is characterized by its adaptation to specific environmental conditions. The Gram-negative nature of F. pacifica str. WPAGA1 indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that is significant for its interaction with the environment and may influence its metabolic pathways and resistance to certain antibiotics. The rod shape of this bacterium is indicative of its cellular morphology, which can play a role in its motility and nutrient absorption capabilities. The optimal temperature of 32.0°C implies that F. pacifica str. WPAGA1 is likely adapted to environments with moderate thermal conditions, potentially including marine or estuarine ecosystems, where such temperatures are commonly found. Understanding the physiological traits of Flammeovirga pacifica str. WPAGA1, particularly its temperature preference and structural characteristics, may provide insights into its ecological role in nutrient cycling or its interactions with other microorganisms in its habitat. Further studies could elucidate the metabolic pathways it employs to thrive in its niche, contributing to our knowledge of microbial diversity and function in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pacifica
StrainWPAGA1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pacifica strain WPAGA1 Scaffold21, whole genome

Gene Summary

Adenine Count

2192809 bp

Thymine Count

2199848 bp

Guanine Count

1071093 bp

Cytosine Count

1082388 bp

Genome Length

6610326 bp

Protein-coding Genes

4855 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine proteaseNH26_18025Not AvailableNegative4554101 - 455628182582.2
hypothetical proteinNH26_18030Not AvailableNegative4556379 - 455764148135.1
4-hydroxy-tetrahydrodipicolinate reductaseNH26_18035Not AvailableNegative4557646 - 455837126769.9
hypothetical proteinNH26_18040Not AvailableNegative4558381 - 455908526982.4
chromosome partitioning protein parbNH26_18045Not AvailableNegative4559085 - 456002935837.4
chromosome partitioning protein paraNH26_18050Not AvailableNegative4560092 - 456087128560.7
polysaccharide deacetylase family proteinNH26_18055Not AvailableNegative4560953 - 456159425024.1
branched-chain-amino-acid transaminaseNH26_18060Not AvailablePositive4562020 - 456291633655.5
dihydroxy-acid dehydrataseNH26_18065Not AvailablePositive4562960 - 456464259027.3
acetolactate synthase, large subunit, biosynthetic typeNH26_18070Not AvailablePositive4564684 - 456642363383.2

Displaying genes 3581 – 3590 of 4943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.