Flammeovirga pacifica str. WPAGA1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga pacifica str. WPAGA1 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 32.0°C, suggesting a mesophilic lifestyle. This microbial strain is part of the genus Flammeovirga, which is characterized by its adaptation to specific environmental conditions. The Gram-negative nature of F. pacifica str. WPAGA1 indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, a feature that is significant for its interaction with the environment and may influence its metabolic pathways and resistance to certain antibiotics. The rod shape of this bacterium is indicative of its cellular morphology, which can play a role in its motility and nutrient absorption capabilities. The optimal temperature of 32.0°C implies that F. pacifica str. WPAGA1 is likely adapted to environments with moderate thermal conditions, potentially including marine or estuarine ecosystems, where such temperatures are commonly found. Understanding the physiological traits of Flammeovirga pacifica str. WPAGA1, particularly its temperature preference and structural characteristics, may provide insights into its ecological role in nutrient cycling or its interactions with other microorganisms in its habitat. Further studies could elucidate the metabolic pathways it employs to thrive in its niche, contributing to our knowledge of microbial diversity and function in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga pacifica
StrainWPAGA1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga pacifica strain WPAGA1 Scaffold21, whole genome

Gene Summary

Adenine Count

2192809 bp

Thymine Count

2199848 bp

Guanine Count

1071093 bp

Cytosine Count

1082388 bp

Genome Length

6610326 bp

Protein-coding Genes

4855 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNH26_16860Not AvailablePositive4269172 - 42694209267.16
hypothetical proteinNH26_16865Not AvailableNegative4269519 - 426998016645.2
hypothetical proteinNH26_16870Not AvailableNegative4270198 - 427069818114.2
hypothetical proteinNH26_16875Not AvailableNegative4270905 - 427139017179.2
hypothetical proteinNH26_16880Not AvailableNegative4271484 - 427203520839.3
hypothetical proteinNH26_16885Not AvailableNegative4272299 - 427283819449.8
abc transporter atp-binding proteinNH26_16890Not AvailableNegative4273076 - 427382828166.0
abc transporter permeaseNH26_16895Not AvailableNegative4273835 - 427456626250.8
hypothetical proteinNH26_16900Not AvailablePositive4274857 - 427512610791.2
uracil phosphoribosyltransferaseNH26_16905Not AvailableNegative4275211 - 427587624306.2

Displaying genes 3351 – 3360 of 4943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.