Pseudovibrio sp. FO-BEG1

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pseudovibrio

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPseudovibrio
SpeciesPseudovibrio sp. FO-BEG1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcoral; Marine
Biotic relationshipsymbionts
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudovibrio sp. FO-BEG1 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

106125 bp

Thymine Count

102936 bp

Guanine Count

113322 bp

Cytosine Count

118729 bp

Genome Length

441112 bp

Protein-coding Genes

377 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glu/leu/phe/val dehydrogenasePSE_RS23375Q53560Positive5196807 - 519789538215.2
lysr family transcriptional regulatorPSE_RS23380Not AvailableNegative5197989 - 519893035240.4
duf2937 family proteinPSE_RS23385Not AvailableNegative5198996 - 519952619332.4
wd40 repeat domain-containing proteinPSE_RS23390Not AvailableNegative5199548 - 520052534289.0
gtp-binding proteinPSE_RS23395Not AvailableNegative5200532 - 520164741625.6
hypothetical proteinPSE_RS23400Not AvailableNegative5201808 - 52020448835.41
pyridoxal phosphate-dependent aminotransferasePSE_RS23405Q59228Positive5202240 - 520341842797.3
apri/inh family metalloprotease inhibitorPSE_RS23410Not AvailableNegative5203422 - 520383814508.0
hypothetical proteinPSE_RS23415Not AvailablePositive5204187 - 520466617451.6
laci family dna-binding transcriptional regulatorPSE_RS23420B7VMG4Negative5204969 - 520601837665.2

Displaying genes 5061 – 5070 of 5320 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

38 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm00016432,5-dichlorocyclohexa-2,5-dien-1,4-diolC6H6Cl2O2Chemical structure of 2,5-dichlorocyclohexa-2,5-dien-1,4-diolNot available
Average181.01Da
Monoisotopic179.9744848Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da

Displaying 1–10 of 38 metabolites

Health Effects

No health effects information available for this bacterium.